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Help us improve the primary database. What do you think and where should we go in the future: https://www.surveymonkey.com/s/RK3GMPC?


Text based search for sequence, mapping, snp data etc: Secure BLAST search against different public databases or non-public sequence data stored in GabiPD. >> go >>
 
Visualisation of genetic or physical maps. >> go >> View interactive 2D-gels and view or download information for identified protein spots. >> go >>
We kindly ask users to cite the following paper when publishing results derived from the use of GabiPD:
Riaño-Pachón DM, Nagel A, Neigenfind J, Wagner R, Basekow R, Weber E, Mueller-Roeber B, Diehl S and B Kersten (2009) GabiPD: the GABI primary database – a plant integrative ‘omics‘ database. Nucleic Acids Research 37(Database issue):D954-9.

News

Archive
Genome annotation for Brachypodium distachyon (purple false brome) integrated into GabiPD (30-DEC-11)
• Brachypodium distachyon genome annotation v1.0 from Phytozome v5.0 was integrated into GabiPD, including gene structures.
• Please find the data via GreenCards with the keyword "Bradi1g*".
• Gene structures are visualized in the cDNA display of every Gene GreenCard.
Make the (Gabi) Primary Database better by just taking a short questionaire (11-OCT-11)
• Help us improve the primary database. This is your chance to have a say about what you really need and want. So please tell us what you think and let us know where we should go in the future at https://www.surveymonkey.com/s/RK3GMPC.
forgotten passwords are things of the past (26-AUG-11)
• Already registered users who have forgotten their password can now automatically receive a new password. Please use the corresponding link at https://www.gabipd.org/registration/.
RYE-EXPRESS further assemblies publicly available (18-AUG-11)
• Further assemblies derived from 454 short reads from five Secale cereale (rye) inbred lines generated within the RYE-EXPRESS project at TUM are publicly available. Please find the data via GreenCards with the keyword "Sce_Assembly03*"
more than 200500 sugar beet fosmid ends available for WPG participants only (30-JUN-11)
• 200511 GSS (fosmid ends) from the sugar beet DH line KWS2320 generated in the GABI-BPM project are exclusively available for WPG participants.
• Please find the data via GreenCards searching for "IGS-SCF-1033*".
Short reads from Hordeum vulgare cultivar Betzes sorted chromosomes public now (09-MAY-11)
• Short reads raw data, obtained using 454 technology, from individual chromosomes of Hordeum vulgare cv Betzes, generated within the GABI-BARLEX project at IPK are publicly available at our Download page; search for GABI-BARLEX.
• Assemblies of the individual chromosomes are publicly blastable now.
GabiPD Webmaster