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Marker (RFLP): GBR0345


Related with
HK03F21 cDNA clone

Mapping Info
map species chr. mapped as position submitter
Consensus Stein2006 Barley 3 GBR0345 166.4  cm Dr. Nils Stein
Dom x Rec Barley 3 GBR0345 177.5  cm Dr. Nils Stein
Related to Sequence, correspondig to BioObject: HK03F21
 
Sequence: HK03F21r
submitter of sequence: Dr. Wolfgang Michalek
length: 608
priming: 3-prime
EBI-Id: HVUL00638
GenBankAc: AL499775
IPK CR-EST: HK03F21r 
HK03F21r
TTTTTTTTTT TTTTTTGCAT TCTAAGGCCT GTCTAAATTT GACAGAGTTA TAAATGGTCT         60
TGAGCAACAA TGTACATTTA CATGTGTTTG TCCTACCACA CAACACAACT GGACGAAGTG        120
CTGCTAATCA TCCTCTATTC TGAACAGAGC TACATCAGTA AGTACATTGG CATATAAAAA        180
TTTGGAGAAT CTACAGTAAG TAATTGGCAG AGCATGTTAT TTCATTTACA ACTTCTGTTA        240
TTCTTCCAGG TGTTGAAAGC ATCTTTCTGT CATGATGCTT CAGTAAATAC TGCATGTTAT        300
TATCAGATGA GCTACCATGC TATTTCGATA GCCTTCTCAG CAGCAAAGAA TGGTTGGATC        360
AGATCTGACC GGGGCCGAGG AAAATGGTTC TGTATATCGC TATGTTCTGA AGATCGATAT        420
GTGCAGGAGA GGGGCTTTAA GTCCGCACGC GGTTTGCCGT AACCATGTTA TATCAAGCTC        480
CATGAATGGC ACCTTATTCG GGCACTGGGG ANTGGGAAGG GCNTTTGCCA ATATACTCAA        540
AACCGACGAC CAAGGAATGC CAAGCCTTTG AATGAAGAAG TAAGATGTAG TATCCCTTGT        600
TTGCGTTA                                                                 608
TypePositionOrientation
ORF 54 - 140: forward
ORF 70 - 174: forward
ORF 214 - 459: forward
ORF 215 - 153: reverse
ORF 294 - 365: forward
ORF 295 - 194: reverse
ORF 350 - 568: forward
ORF 486 - 572: forward
ORF 606 - 403: reverse
ORF 607 - 497: reverse
Cluster Info:
Contig11396.1 (5 members)
view Blast Searches
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