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Marker (SNP): GBS0138


Related with
HW02G06 cDNA clone

Mapping Info
map species chr. mapped as position submitter
Steptoe x Morex Barley 5 GBS0138 107.2  cm Dr. Nils Stein
Consensus Stein2006 Barley 5 GBS0138 139.7  cm Dr. Nils Stein
Related to Sequence, correspondig to BioObject: HW02G06
 
Sequence: HW02G06u
submitter of sequence: Dr. Wolfgang Michalek
length: 629
priming: 3-prime
EBI-Id: HVUL01761
GenBankAc: AL500919
IPK CR-EST: HW02G06u 
HW02G06u
TTTTTTTTTT TTTTTTTTTG ACCAGCCTTA CAGTGCATTC AGATACAGCG GCACATGTGA         60
ATCAAGGTGT AGGAGAGCTA CAGCGTGTGA CATTCCATCG TGTTGGCGTT ATACAGAGTG        120
GAATACGTAT ATATATCAGA ATGTGCGTTA CATATGGTGG ATCCCAACGA AATGGTGTCT        180
ACCTAACCGA GGAGAGAGAT CACCAGGCAA GGAAACACTA TTGGCCATTA CTGCTGGGTT        240
CTACTTCGGC TGTCCCGTTG GCGGTCCCTT CAAACTTGGG CAACTGCAGC TGCCTCTTCA        300
CCAGGGCCGT GTAGATGCCG TCGCGCTCGA GGAGCTCGTC GTGCGTGCCG CTCTCCACGA        360
TCTGGCCCTC AGAGATGACG GCAACCGTGT CGGCGCTCTT CACGGTGGAG AGCCGATGAG        420
CTATCACAAG AACCGTCCTC CCTTTCATCA ACGAGTCCAT TGCATCCTGA ACAAGGTATT        480
CGCTTTCGGC ATCCAAGGGC ACTGGTANGC TTCATCTAAG AGAAAGCACT CGTGGGGTTC        540
ATAAGCAAAG CTCTTGCAAT GGGCGGACCC TCTGCTTTCT GCCCCGCCAA GAATAACCTG        600
GATTGNCCCC GGCTCTCCCA ACGAACAGG                                          629
TypePositionOrientation
ORF 2 - 541: forward
ORF 3 - 311: forward
ORF 93 - 31: reverse
ORF 228 - 151: reverse
ORF 315 - 416: forward
ORF 460 - 221: reverse
ORF 515 - 372: reverse
ORF 559 - 627: forward
ORF 627 - 451: reverse
ORF 628 - 542: reverse
ORF 629 - 519: reverse
Cluster Info:
Contig3305.1 (5 members)
view Blast Searches
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