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Marker (SNP): GBS0157


Related with
HY05E05 cDNA clone

Mapping Info
map species chr. mapped as position submitter
Igri x Franka Barley 6 GBS0157 25.8  cm Dr. Nils Stein
Consensus Stein2006 Barley 6 GBS0157 33.5  cm Dr. Nils Stein
Related to Sequence, correspondig to BioObject: HY05E05
 
Sequence: HY05E05u
submitter of sequence: Dr. Wolfgang Michalek
length: 537
priming: 3-prime
EBI-Id: HVUL11386
GenBankAc: AL510544
IPK CR-EST: HY05E05u
Sequence features and Clone alignments (BLAST):
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Gene structure   UTR    start codon    stop codon    exon-exon border 
Clone alignments   forward    reverse    start    stop 
Protein domains   domain       
Click on sequence features to obtain additional information.
 
HY05E05u
TTTTTTTTTT TTTTTTTTAC GGATAATTCA TAGCGGAGTT CATCTCATTC ATTCAAACGG         60
TAACAGACAA GGGAAGATAA CCATGGCGGC CGGACGCAGA TCCAGCAGCC TAAAGAGTCC        120
ACCTAAAACC CTCCTAAACC AACCACGGAG ATCTCATCGG ACGGACAGGG GCAAGACACG        180
ACACGACTTC TTATTTAGAC CGACGACACG ACAGGGGACA CATGGCACGA CGACGACGAC        240
TACGGGCGAG CGCGACGGGC GGACGGACCT AGAGCTGGCC GCAGTCGGCG ATGACGACCT        300
GCTTGGAGCA GATGCCGCTG CGGGAGCCCA CCTTCTCGAT GTTCTTGACG ACGTCCATGC        360
CCTCGACGAC CTCGCCGAAG ACCACGTGCT TGCCGTCGAG CCAATTGCAG GGGACGGTGC        420
AGATGAAGAA CTGGGAGCCG TTGGTGTTTG GGCCCGGGCG TTTGGCCATG GGANAGGATC        480
CCTGGGCTTG GGGTGTGCCT TGGTGGGACG AAACTTTCTC GTCGGGCGAA ACTTTCT           537
TypePositionOrientation
ORF 83 - 535: forward
ORF 291 - 536: forward
ORF 535 - 272: reverse
ORF 536 - 243: reverse
ORF 537 - 157: reverse
Cluster Info:
Contig13.1 (328 members)
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