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Marker (RFLP): GBR0248


Related with
HY05K13 cDNA clone

Mapping Info
map species chr. mapped as position submitter
Consensus Stein2006 Barley 6 GBR0248 36  cm Dr. Nils Stein
Igri x Franka Barley 6 GBR0248 28.1  cm Dr. Nils Stein
Related to Sequence, correspondig to BioObject: HY05K13
 
Sequence: HY05K13u
submitter of sequence: Dr. Wolfgang Michalek
length: 676
priming: 3-prime
EBI-Id: HVUL11513
GenBankAc: AL510671
IPK CR-EST: HY05K13u
Sequence features and Clone alignments (BLAST):
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Gene structure   UTR    start codon    stop codon    exon-exon border 
Clone alignments   forward    reverse    start    stop 
Protein domains   domain       
Click on sequence features to obtain additional information.
 
HY05K13u
TTTTTTTTTT TTTTTTTTTT TTTTTTTACA AAACAAACCA GTATTTGATC TTTCATCAAC         60
ATCGATTAAT AGAAAACATA AACAGTATTT TGCCGTGTTG AAGCACTGCG TTAAAAACGC        120
ATTCACATTC ACAGGAACAA ATTTATTCTG CTTGGCAGAA GCAGCATATT GCAGGCAAAG        180
GACACATGAA ACTAGTCTCA ACTACACACT GCAACAGGTG ACAAATGATG CATCTTGAAG        240
AGTTCAAGTT TTTATGACTT CACTTGCGGA GGAGAGTCAC CCTGCAGAGC TGGATCTGAC        300
TTGATGGCAT CTAGTGTCTT GAAGAACTCC TCGGGTAGTG CAACGGGCCG GTGCTGCGGA        360
ACATGCTTGG GAATAGGTGT GTTATCTTCA ATCACCTCGC ATTCGTAGTC ATCAGGAACA        420
CCCCAGGGAT CCCACTCGAT CATCTTGCCG AATNAGCTTT GAGCTCGTCC TGGGCCCTCC        480
TCGAATAAGC TCTTCAACCT GGGCCGCANC CCGAGGNGGT CCTCGATGCG CTTCCAAGTC        540
CTCCTCCCTC CTGGGCAGAT TCTGGGAGGC GAATGGCGGG GTGAAAGGGA CTCGAACGGC        600
CTTGCGGGGT AACCCTCCGT NCCTTTGGGG GGAACGGCCC CCCGAATTTC CCCTTTGAAG        660
GGGTNGCCCC GTTGTT                                                        676
TypePositionOrientation
ORF 2 - 235: forward
ORF 3 - 98: forward
ORF 304 - 405: forward
ORF 363 - 485: forward
ORF 526 - 609: forward
ORF 674 - 255: reverse
ORF 675 - 415: reverse
ORF 676 - 497: reverse
Cluster Info:
Contig527.1 (40 members)
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