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Gene: AT2G45960.3


  Alternative name:PIP1B, TMP-A, ATHH2, PIP1;2
  Alternative name:AT2G45960
  Alternative name:ATHH2
  Alternative name:PIP1;2
  Alternative name:NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1;2
  Alternative name:PIP1B
  Alternative name:NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B
  Alternative name:TMP-A
  Alternative name:TRANSMEMBRANE PROTEIN A

Genotype (Genotype)
  species: Arabidopsis thaliana
  type: wildtype
  common name: thale cress
  cultivar: Columbia

Gene function:
PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel (TAIR 9.0)

Gene Ontology
GO termIdentifierType
water channel activityGO:0015250molecular function
water transportGO:0006833biological process
response to salt stressGO:0009651biological process
response to water deprivationGO:0009414biological process
transportGO:0006810biological process
plasma membraneGO:0005886cellular component
membraneGO:0016020cellular component

Related with
254239_at Affymetrix representative on ATH1-121501
251324_at Affymetrix representative on ATH1-121501
266927_at Affymetrix representative on ATH1-121501
259431_at Affymetrix representative on ATH1-121501
255674_at Affymetrix representative on ATH1-121501
MPIZp2000B232Q cDNA clone
MPIZp2000A164Q cDNA clone
MPIZp2001D101Q cDNA clone
MPMGp2011O21203 cDNA clone
MPMGp2011K23210 cDNA clone
MPIZp2001M161Q cDNA clone
MPMGp2011D03207 cDNA clone
MPIZp2000B023Q cDNA clone
MPIZp2001D071Q cDNA clone
MPIZp2001O184Q cDNA clone
MPIZp2000L222Q cDNA clone
E10G11T7 cDNA clone
MPIZp2000H112Q cDNA clone
MPMGp2011M21211 cDNA clone
221P9T7 cDNA clone
MPIZp2001D202Q cDNA clone
MPIZp2000P014Q cDNA clone
MPIZp772C135Q cDNA clone
MPIZp767J1019Q cDNA clone
MPIZp772O206Q cDNA clone
MSU_p955P1628 cDNA clone
MPIZp772H096Q cDNA clone
MPIZp2000F224Q cDNA clone
MPIZp768B029Q cDNA clone
MPIZp772M067Q cDNA clone
MPIZp767K2115Q cDNA clone
MSU_p955J1031 cDNA clone
MPIZp1022F2422Q cDNA clone
CK268727 cDNA clone
MPIZp1022E1213Q cDNA clone
MPIZp1022P2319Q cDNA clone
MPIZp1022A0514Q cDNA clone
CK862777 cDNA clone
MPIZp1022B0210Q cDNA clone
CK275429 cDNA clone
024-026-D20 cDNA clone
MPIZp1022E053Q cDNA clone
MPIZp1022G013Q cDNA clone
CK279808 cDNA clone
CK263840 cDNA clone
MPIZp1022I1117Q cDNA clone
CK262189 cDNA clone
MPIZp1022F1312Q cDNA clone
MSU_p955H0618 cDNA clone
MSU_p955D0419 cDNA clone
MPIZp770A123Q cDNA clone
MSU_p955B0415 cDNA clone
MPIZp770K239Q cDNA clone
MPIZp769P052Q cDNA clone
197D21T7 cDNA clone
MSU_p955B1419 cDNA clone
MPMGp2011P01208 cDNA clone
MPIZp771G094Q cDNA clone
MPIZp770L022Q cDNA clone
MPIZp771B184Q cDNA clone
MPIZp771B234Q cDNA clone
MPIZp769P073Q cDNA clone
F4E12T7 cDNA clone
MPIZp771N144Q cDNA clone
MSU_p955D0727 cDNA clone
MSU_p955H1317 cDNA clone
MSU_p955L2327 cDNA clone
MPIZp772L047Q cDNA clone
MPIZp771C053Q cDNA clone
MPIZp771O054Q cDNA clone
F4F1T7 cDNA clone
MPIZp771E232Q cDNA clone
MPMGp2011I21206 cDNA clone
MPIZp771O082Q cDNA clone
MPIZp770A034Q cDNA clone
CV651206 cDNA clone
BG886553 cDNA clone
BG097083 cDNA clone
BF153976 cDNA clone
CK278721 cDNA clone
CK273941 cDNA clone
BF459583 cDNA clone
MSU_p955B0711 cDNA clone
MSU_p955J2420 cDNA clone
MSU_p955N1920 cDNA clone
MSU_p955D2123 cDNA clone
MSU_p955N2115 cDNA clone
BM405172 cDNA clone
BM408403 cDNA clone
STDB003B15 cDNA clone
CK565578 cDNA clone
CK260612 cDNA clone
CK275583 cDNA clone
BM407777 cDNA clone

External resources
TAIR
MIPS
PlnTFDB
Aramemnon
SUBA
Arabidopsis eFP browser
Cell eFP Browser
Atted
ProMEX
IntAct
PhosPhAT
iHOP (AT2G45960)
iHOP (ATHH2)
iHOP (PIP1;2)
iHOP (PIP1B)
iHOP (TMP-A)
 
Sequence: AT2G45960.3
submitter of sequence: public data
length: 906
description: coding sequence (TAIR 9.0) 
AT2G45960.3
ATGGAAGGTA AAGAAGAAGA TGTTAGAGTC GGAGCTAACA AGTTTCCGGA GAGGCAACCG         60
ATCGGAACTT CGGCTCAGAG TGACAAGGAC TACAAAGAGC CACCACCTGC GCCGTTGTTC        120
GAGCCCGGCG AGCTAGCTTC ATGGTCCTTC TGGAGAGCTG GGATTGCTGA GTTTATAGCT        180
ACGTTTTTGT TCCTGTACAT CACTGTTTTG ACTGTTATGG GTGTGAAGAG GTCACCGAAC        240
ATGTGTGCTT CCGTCGGAAT CCAAGGTATC GCTTGGGCTT TCGGTGGTAT GATCTTCGCT        300
CTCGTCTACT GCACCGCTGG TATCTCCGGT GGACACATCA ACCCAGCGGT TACGTTCGGT        360
TTGTTCTTAG CTAGGAAGCT TTCGCTCACA CGAGCTGTGT ACTACATAGT GATGCAGTGC        420
TTAGGAGCTA TCTGTGGAGC TGGTGTGGTC AAGGGGTTCC AGCCAAAGCA ATACCAGGCT        480
TTGGGAGGTG GAGCCAACAC CATAGCTCAT GGCTACACCA AAGGAAGTGG TCTTGGAGCT        540
GAGATTATTG GAACCTTTGT CCTTGTTTAC ACCGTCTTCT CTGCCACTGA TGCCAAGAGA        600
AACGCTCGTG ACTCTCATGT TCCTATTCTA GCACCGCTCC CTATCGGATT CGCTGTGTTC        660
TTGGTTCACT TAGCAACCAT CCCCATTACT GGAACTGGAA TCAACCCAGC AAGAAGTCTT        720
GGAGCTGCAA TCATCTTCAA CAAGGACAAC GCTTGGGATG ACCACGTGAT GGGTCTTTTG        780
GGTTGGACCA TTCATTGGTG CTGCACTTGC TGCTCTCTAC CACGTTATAG TCATCAGAGC        840
CATCCCATTC AAGTCCAGAA GCTAAAGCTG ATTGAGTTCT ATTTAAAATC TGGCTTTTGT        900
TCTTAG                                                                   906
 
Sequence: AT2G45960.3
submitter of sequence: public data
length: 302
description: amino acid sequence (TAIR 9.0) 
AT2G45960.3
MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELASWSF WRAGIAEFIA         60
TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA LVYCTAGISG GHINPAVTFG        120
LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTIAH GYTKGSGLGA        180
EIIGTFVLVY TVFSATDAKR NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL        240
GAAIIFNKDN AWDDHVMGLL GWTIHWCCTC CSLPRYSHQS HPIQVQKLKL IEFYLKSGFC        300
S*                                                                       302
 
Sequence: AT2G45960.3
submitter of sequence: public data
length: 1299
description: cdna sequence (TAIR 9.0)
Sequence features and Clone alignments (BLAST):
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Gene structure   UTR    start codon    stop codon    exon-exon border 
Clone alignments   forward    reverse    start    stop 
Protein domains   domain       
Click on sequence features to obtain additional information.
 
AT2G45960.3
AACTATCATC TTGTTTATGT TTTAATTTTG TTTCCATCAT CTTCCAACCT TGAGTTTCGG         60
TCACTATAAA AAGCCACCAC TCTCTCTGCT TCTCTGCAAC ACATAACCCA CTCACAGAAA        120
AACCTAGAAA GCTCTAGAGA GAAAGAGAGA GAGAGATGGA AGGTAAAGAA GAAGATGTTA        180
GAGTCGGAGC TAACAAGTTT CCGGAGAGGC AACCGATCGG AACTTCGGCT CAGAGTGACA        240
AGGACTACAA AGAGCCACCA CCTGCGCCGT TGTTCGAGCC CGGCGAGCTA GCTTCATGGT        300
CCTTCTGGAG AGCTGGGATT GCTGAGTTTA TAGCTACGTT TTTGTTCCTG TACATCACTG        360
TTTTGACTGT TATGGGTGTG AAGAGGTCAC CGAACATGTG TGCTTCCGTC GGAATCCAAG        420
GTATCGCTTG GGCTTTCGGT GGTATGATCT TCGCTCTCGT CTACTGCACC GCTGGTATCT        480
CCGGTGGACA CATCAACCCA GCGGTTACGT TCGGTTTGTT CTTAGCTAGG AAGCTTTCGC        540
TCACACGAGC TGTGTACTAC ATAGTGATGC AGTGCTTAGG AGCTATCTGT GGAGCTGGTG        600
TGGTCAAGGG GTTCCAGCCA AAGCAATACC AGGCTTTGGG AGGTGGAGCC AACACCATAG        660
CTCATGGCTA CACCAAAGGA AGTGGTCTTG GAGCTGAGAT TATTGGAACC TTTGTCCTTG        720
TTTACACCGT CTTCTCTGCC ACTGATGCCA AGAGAAACGC TCGTGACTCT CATGTTCCTA        780
TTCTAGCACC GCTCCCTATC GGATTCGCTG TGTTCTTGGT TCACTTAGCA ACCATCCCCA        840
TTACTGGAAC TGGAATCAAC CCAGCAAGAA GTCTTGGAGC TGCAATCATC TTCAACAAGG        900
ACAACGCTTG GGATGACCAC GTGATGGGTC TTTTGGGTTG GACCATTCAT TGGTGCTGCA        960
CTTGCTGCTC TCTACCACGT TATAGTCATC AGAGCCATCC CATTCAAGTC CAGAAGCTAA       1020
AGCTGATTGA GTTCTATTTA AAATCTGGCT TTTGTTCTTA GTTTGCTTTC TTTTGTGAAT       1080
CTACTACCTG TGTGTAACGT GTGTATCTGT TGTCCTCTTC TTTGCCTAAT GGAGACTTAT       1140
GTAAAACAAA GACATGCCCC AGAAACATCT GTTATCTTTC TTCTCCATTT TATCAGAGGA       1200
TTTCTATAAT TGGCCCATTC TGGGTTTATC TCAAGCAGGC AACTTATCTT GAATCAAAGT       1260
GGACCAGACA TATTTAATGC ATTTATGTTA TAATCTGCT                              1299
 
Sequence: AT2G45960.3
submitter of sequence: public data
length: 1688
description: genomic sequence (TAIR 9.0) 
AT2G45960.3
AACTATCATC TTGTTTATGT TTTAATTTTG TTTCCATCAT CTTCCAACCT TGAGTTTCGG         60
TCACTATAAA AAGCCACCAC TCTCTCTGCT TCTCTGCAAC ACATAACCCA CTCACAGAAA        120
AACCTAGAAA GCTCTAGAGA GAAAGAGAGA GAGAGATGGA AGGTAAAGAA GAAGATGTTA        180
GAGTCGGAGC TAACAAGTTT CCGGAGAGGC AACCGATCGG AACTTCGGCT CAGAGTGACA        240
AGGACTACAA AGAGCCACCA CCTGCGCCGT TGTTCGAGCC CGGCGAGCTA GCTTCATGGT        300
CCTTCTGGAG AGCTGGGATT GCTGAGTTTA TAGCTACGTT TTTGTTCCTG TACATCACTG        360
TTTTGACTGT TATGGGTGTG AAGAGGTCAC CGAACATGTG TGCTTCCGTC GGAATCCAAG        420
GTATCGCTTG GGCTTTCGGT GGTATGATCT TCGCTCTCGT CTACTGCACC GCTGGTATCT        480
CCGGTAAGTT CACTGGTTTC TCCGATCTAA CGATTTCGAA TATAGATCCT GTGTTAGCTA        540
GGTAGCGTAA TTCAAATCTT AGCATGTTTA GGATTCAATC AGGAACAAAT TAGGGTTTAC        600
AAACTCAGTA AATGGGGGAC TTTGATGTTA GTTCCAGCTT TGTTCTGCTT GGAATCATTT        660
GATTTGCAGA TGTTTTAATC TGTGTTTGTG TATGTTATGA CCTTTCAGGT GGACACATCA        720
ACCCAGCGGT TACGTTCGGT TTGTTCTTAG CTAGGAAGCT TTCGCTCACA CGAGCTGTGT        780
ACTACATAGT GATGCAGTGC TTAGGAGCTA TCTGTGGAGC TGGTGTGGTC AAGGGGTTCC        840
AGCCAAAGCA ATACCAGGCT TTGGGAGGTG GAGCCAACAC CATAGCTCAT GGCTACACCA        900
AAGGAAGTGG TCTTGGAGCT GAGATTATTG GAACCTTTGT CCTTGTTTAC ACCGTCTTCT        960
CTGCCACTGA TGCCAAGAGA AACGCTCGTG ACTCTCATGT TCCTGTAAGT TTATCAATAA       1020
AGGATGGATT TTGGTTTTTG TAACATCGGA TCAAAATGCT TAATTGGTTT TGAAATTTTG       1080
ACAGATTCTA GCACCGCTCC CTATCGGATT CGCTGTGTTC TTGGTTCACT TAGCAACCAT       1140
CCCCATTACT GGAACTGGAA TCAACCCAGC AAGAAGTCTT GGAGCTGCAA TCATCTTCAA       1200
CAAGGACAAC GCTTGGGATG ACCACGTGAG TGTTTCACTT CTCACCAAAT TTACAATTCA       1260
GAGTAAGGTT TCAATTATCG GATAACTAAT CTAGCTGTAT CTTCTTCTCT CAGTGGGTCT       1320
TTTGGGTTGG ACCATTCATT GGTGCTGCAC TTGCTGCTCT CTACCACGTT ATAGTCATCA       1380
GAGCCATCCC ATTCAAGTCC AGAAGCTAAA GCTGATTGAG TTCTATTTAA AATCTGGCTT       1440
TTGTTCTTAG TTTGCTTTCT TTTGTGAATC TACTACCTGT GTGTAACGTG TGTATCTGTT       1500
GTCCTCTTCT TTGCCTAATG GAGACTTATG TAAAACAAAG ACATGCCCCA GAAACATCTG       1560
TTATCTTTCT TCTCCATTTT ATCAGAGGAT TTCTATAATT GGCCCATTCT GGGTTTATCT       1620
CAAGCAGGCA ACTTATCTTG AATCAAAGTG GACCAGACAT ATTTAATGCA TTTATGTTAT       1680
AATCTGCT                                                                1688
 
Sequence: AT2G45960.2
submitter of sequence: public data
length: 1688
description: genomic sequence (TAIR 9.0) 
AT2G45960.2
AACTATCATC TTGTTTATGT TTTAATTTTG TTTCCATCAT CTTCCAACCT TGAGTTTCGG         60
TCACTATAAA AAGCCACCAC TCTCTCTGCT TCTCTGCAAC ACATAACCCA CTCACAGAAA        120
AACCTAGAAA GCTCTAGAGA GAAAGAGAGA GAGAGATGGA AGGTAAAGAA GAAGATGTTA        180
GAGTCGGAGC TAACAAGTTT CCGGAGAGGC AACCGATCGG AACTTCGGCT CAGAGTGACA        240
AGGACTACAA AGAGCCACCA CCTGCGCCGT TGTTCGAGCC CGGCGAGCTA GCTTCATGGT        300
CCTTCTGGAG AGCTGGGATT GCTGAGTTTA TAGCTACGTT TTTGTTCCTG TACATCACTG        360
TTTTGACTGT TATGGGTGTG AAGAGGTCAC CGAACATGTG TGCTTCCGTC GGAATCCAAG        420
GTATCGCTTG GGCTTTCGGT GGTATGATCT TCGCTCTCGT CTACTGCACC GCTGGTATCT        480
CCGGTAAGTT CACTGGTTTC TCCGATCTAA CGATTTCGAA TATAGATCCT GTGTTAGCTA        540
GGTAGCGTAA TTCAAATCTT AGCATGTTTA GGATTCAATC AGGAACAAAT TAGGGTTTAC        600
AAACTCAGTA AATGGGGGAC TTTGATGTTA GTTCCAGCTT TGTTCTGCTT GGAATCATTT        660
GATTTGCAGA TGTTTTAATC TGTGTTTGTG TATGTTATGA CCTTTCAGGT GGACACATCA        720
ACCCAGCGGT TACGTTCGGT TTGTTCTTAG CTAGGAAGCT TTCGCTCACA CGAGCTGTGT        780
ACTACATAGT GATGCAGTGC TTAGGAGCTA TCTGTGGAGC TGGTGTGGTC AAGGGGTTCC        840
AGCCAAAGCA ATACCAGGCT TTGGGAGGTG GAGCCAACAC CATAGCTCAT GGCTACACCA        900
AAGGAAGTGG TCTTGGAGCT GAGATTATTG GAACCTTTGT CCTTGTTTAC ACCGTCTTCT        960
CTGCCACTGA TGCCAAGAGA AACGCTCGTG ACTCTCATGT TCCTGTAAGT TTATCAATAA       1020
AGGATGGATT TTGGTTTTTG TAACATCGGA TCAAAATGCT TAATTGGTTT TGAAATTTTG       1080
ACAGATTCTA GCACCGCTCC CTATCGGATT CGCTGTGTTC TTGGTTCACT TAGCAACCAT       1140
CCCCATTACT GGAACTGGAA TCAACCCAGC AAGAAGTCTT GGAGCTGCAA TCATCTTCAA       1200
CAAGGACAAC GCTTGGGATG ACCACGTGAG TGTTTCACTT CTCACCAAAT TTACAATTCA       1260
GAGTAAGGTT TCAATTATCG GATAACTAAT CTAGCTGTAT CTTCTTCTCT CAGTGGGTCT       1320
TTTGGGTTGG ACCATTCATT GGTGCTGCAC TTGCTGCTCT CTACCACGTT ATAGTCATCA       1380
GAGCCATCCC ATTCAAGTCC AGAAGCTAAA GCTGATTGAG TTCTATTTAA AATCTGGCTT       1440
TTGTTCTTAG TTTGCTTTCT TTTGTGAATC TACTACCTGT GTGTAACGTG TGTATCTGTT       1500
GTCCTCTTCT TTGCCTAATG GAGACTTATG TAAAACAAAG ACATGCCCCA GAAACATCTG       1560
TTATCTTTCT TCTCCATTTT ATCAGAGGAT TTCTATAATT GGCCCATTCT GGGTTTATCT       1620
CAAGCAGGCA ACTTATCTTG AATCAAAGTG GACCAGACAT ATTTAATGCA TTTATGTTAT       1680
AATCTGCT                                                                1688
 
Sequence: AT2G45960.1
submitter of sequence: public data
length: 1688
description: genomic sequence (TAIR 9.0) 
AT2G45960.1
AACTATCATC TTGTTTATGT TTTAATTTTG TTTCCATCAT CTTCCAACCT TGAGTTTCGG         60
TCACTATAAA AAGCCACCAC TCTCTCTGCT TCTCTGCAAC ACATAACCCA CTCACAGAAA        120
AACCTAGAAA GCTCTAGAGA GAAAGAGAGA GAGAGATGGA AGGTAAAGAA GAAGATGTTA        180
GAGTCGGAGC TAACAAGTTT CCGGAGAGGC AACCGATCGG AACTTCGGCT CAGAGTGACA        240
AGGACTACAA AGAGCCACCA CCTGCGCCGT TGTTCGAGCC CGGCGAGCTA GCTTCATGGT        300
CCTTCTGGAG AGCTGGGATT GCTGAGTTTA TAGCTACGTT TTTGTTCCTG TACATCACTG        360
TTTTGACTGT TATGGGTGTG AAGAGGTCAC CGAACATGTG TGCTTCCGTC GGAATCCAAG        420
GTATCGCTTG GGCTTTCGGT GGTATGATCT TCGCTCTCGT CTACTGCACC GCTGGTATCT        480
CCGGTAAGTT CACTGGTTTC TCCGATCTAA CGATTTCGAA TATAGATCCT GTGTTAGCTA        540
GGTAGCGTAA TTCAAATCTT AGCATGTTTA GGATTCAATC AGGAACAAAT TAGGGTTTAC        600
AAACTCAGTA AATGGGGGAC TTTGATGTTA GTTCCAGCTT TGTTCTGCTT GGAATCATTT        660
GATTTGCAGA TGTTTTAATC TGTGTTTGTG TATGTTATGA CCTTTCAGGT GGACACATCA        720
ACCCAGCGGT TACGTTCGGT TTGTTCTTAG CTAGGAAGCT TTCGCTCACA CGAGCTGTGT        780
ACTACATAGT GATGCAGTGC TTAGGAGCTA TCTGTGGAGC TGGTGTGGTC AAGGGGTTCC        840
AGCCAAAGCA ATACCAGGCT TTGGGAGGTG GAGCCAACAC CATAGCTCAT GGCTACACCA        900
AAGGAAGTGG TCTTGGAGCT GAGATTATTG GAACCTTTGT CCTTGTTTAC ACCGTCTTCT        960
CTGCCACTGA TGCCAAGAGA AACGCTCGTG ACTCTCATGT TCCTGTAAGT TTATCAATAA       1020
AGGATGGATT TTGGTTTTTG TAACATCGGA TCAAAATGCT TAATTGGTTT TGAAATTTTG       1080
ACAGATTCTA GCACCGCTCC CTATCGGATT CGCTGTGTTC TTGGTTCACT TAGCAACCAT       1140
CCCCATTACT GGAACTGGAA TCAACCCAGC AAGAAGTCTT GGAGCTGCAA TCATCTTCAA       1200
CAAGGACAAC GCTTGGGATG ACCACGTGAG TGTTTCACTT CTCACCAAAT TTACAATTCA       1260
GAGTAAGGTT TCAATTATCG GATAACTAAT CTAGCTGTAT CTTCTTCTCT CAGTGGGTCT       1320
TTTGGGTTGG ACCATTCATT GGTGCTGCAC TTGCTGCTCT CTACCACGTT ATAGTCATCA       1380
GAGCCATCCC ATTCAAGTCC AGAAGCTAAA GCTGATTGAG TTCTATTTAA AATCTGGCTT       1440
TTGTTCTTAG TTTGCTTTCT TTTGTGAATC TACTACCTGT GTGTAACGTG TGTATCTGTT       1500
GTCCTCTTCT TTGCCTAATG GAGACTTATG TAAAACAAAG ACATGCCCCA GAAACATCTG       1560
TTATCTTTCT TCTCCATTTT ATCAGAGGAT TTCTATAATT GGCCCATTCT GGGTTTATCT       1620
CAAGCAGGCA ACTTATCTTG AATCAAAGTG GACCAGACAT ATTTAATGCA TTTATGTTAT       1680
AATCTGCT                                                                1688
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