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PCR-Product: BA228D23-T3_54

Genotype (Genotype)
  species: Solanum tuberosum
  common name: potato
  cultivar: P54
  ploidie: diploid

forwardPrimer: BA228d23t3f
 annealing temperature:56°C
 sequence:GTGATCTGGAATCTTTGACATCTG
reversePrimer: BA228d23t3r
 annealing temperature:56°C
 sequence:AAAAGCTTTTAATATTTGGGCCGC
 
Sequence: 05-8874-rickert-54-228a_54
submitter of sequence: Dr. Andreas Rickert
length: 249
Sequence aligned to others: View Alignment 
05-8874-rickert-54-228a_54
CGTAGGTAAA TTTTCAAGGT CCAACCGCAA AATATATATG TTTGACTTGA AATTTACCCA         60
TAGAGCAAAC GAGATCAAAA GTTCAAAAAT ATCTACCTCG AAAGTCATTC TTGTAAATCA        120
TTCCGAGAAG AGTACTCTTA ACAAATGGAC ACACATCCTC ATGGGCCACA TGAGGGCCCA        180
TGAAATTTTT CCTTCAT|ATA TATTGGGCGG CTTAAATACA CCGGCCCAAA AAACTTAAGC        240
ATCTCTTAT                                                                249
SNPleft flanking [allel] right flanking
SNP25 AAATTTTCAA[G/G]GTCCAACCGC
SNP33 AAGGTCCAAC[C/C]GCAAAATATA
SNP43 CGCAAAATAT[A/A]TATGTTTGAC
SNP45 CAAAATATAT[A/A]TGTTTGACTT
INDEL50 TATATATGTT[T/T]GACTTGAAAT
SNP59 TTGACTTGAA[A/A]TTTACCCATA
SNP111 TACCTCGAAA[G/G]TCATTCTTGT
INDEL117 GAAAGTCATT[CTTGTAAATCATT/CTTGTAAATCATT]CCGAGAAGAG
SNP143 AGAAGAGTAC[T/T]CTTAACAAAT
SNP145 AAGAGTACTC[T/T]TAACAAATGG
SNP148 AGTACTCTTA[A/A]CAAATGGACA
SNP174 CCTCATGGGC[C/C]ACATGAGGGC
SNP189 GAGGGCCCAT[G/G]AAATTTTTCC
SNP193 GCCCATGAAA[T/T]TTTTCCTTCA
INDEL205 TTTCCTTCAT[2/2]ATATATTGGG
INDEL218 TATATTGGGC[GGCTT/GGCTT]AAATACACCG
SNP232 TAAATACACC[G/G]GCCCAAAAAA
INDEL246 CAAAAAACTT[A/A]AGCATCTCTT
view Blast Searches
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