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Clone: MPIZp2001K124Q

Genotype (Genotype)
  species: Arabidopsis thaliana
  type: wildtype
  common name: thale cress
  cultivar: Wassilewskija-0 (Ws-0)
Library:
  lib name: MPIZp2001
  tissue: root
  cloning vector: pCMVSPORT6 site_1: SalI; site_2: Not1
  host: E. coli TOP10
  library description:
  cDNA library from Arabidopsis thaliana, accession Wassilewskija-0; roots from three weeks old plants grown on MS-plates at 26?C with 16 hours light/day; library was made at the Max-Planck-Institute for Plant Breeding Research, Cologne, Germany; cloning sites SalI-NotI, primer sites and orientation: SP6-SalI-CCACGCGTCCG-5prime-cDNA-polyA-CC-NotI-T7; GATEWAY compatible; Note: Sequencing granted in the context of the GABI Arabidopsis Verbund I: Genetic Diversity, "Establishment of high-efficiency SNP-based mapping tools and development of methods for genome-wide mutation detection" PI: Bernd Weisshaar Sequence submission managed by RZPD/GABI-Primary database: http://gabi.rzpd.de. This clone is available from RZPD; contact RZPD (clone@rzpd.de) for further information.

Material available:

Related with
At3g24830 annotated gene (TIGR5)
257599_at Affymetrix representative on ATH1-121501
AT3G24830.1 annotated gene (TAIR7)
AT4G13170.1 annotated gene (TAIR7)
AT3G07110.1 annotated gene (TAIR7)
AT5G48760.1 annotated gene (TAIR7)
At.23983 unigene cluster
AT3G07110.2 annotated gene (TAIR7)
AT5G48760.2 annotated gene (TAIR7)
At.23983 unigene cluster
Zm.81742 unigene cluster
Bol.4025 unigene cluster
Bra.2565 unigene cluster
Bna.13433 unigene cluster
At.3259 unigene cluster
At.25519 unigene cluster
At.20766 unigene cluster
Bra.14940 unigene cluster
Bra.106 unigene cluster
Zm.81614 unigene cluster
Bol.5548 unigene cluster
Bra.3069 unigene cluster
Pth.16672 unigene cluster
Bol.8195 unigene cluster
Pth.10744 unigene cluster
Bra.3707 unigene cluster
Bna.5136 unigene cluster
Bna.9244 unigene cluster
Can.2186 unigene cluster
Tcc.13814 unigene cluster
Ghi.12894 unigene cluster
Lsa.7078 unigene cluster
AT3G24830.1 annotated gene (TAIR9)
AT4G13170.1 annotated gene (TAIR9)
AT3G07110.1 annotated gene (TAIR9)
AT5G48760.1 annotated gene (TAIR9)
AT5G48760.2 annotated gene (TAIR9)
AT3G07110.2 annotated gene (TAIR9)
 
Sequence: 46-L020578-066-004-K12-SP6P
submitter of sequence: Prof. Dr. Bernd Weisshaar
length: 796
priming: 5-prime
GenBankAc: CF652299 
46-L020578-066-004-K12-SP6P
GGAAGCTAAG GAGAGGCGAA TTCGAATCGA GAAGATGGTG TCTGGCTCAG GGATATGTTC         60
AAAGCGTGTC GTTGTTGACG CACGTCACCA TATGTGTGGT CGTCTTGCTT CGATCATAGC        120
TAAAGAGTTG CTCAATGGAC AGAGTGTTGT TGTTGTCCGA TGTGAGGAGA TTTGTTTGTC        180
TGGTGGTTTG GTTCGTCAGA AGATGAAGTA CATGAGGTTT CTTAGGAAAC GCATGAACAC        240
TAAACCTTCT CATGGTCCTA TTCATTTCCG TGCTCCGTCT AAGATCTTCT GGCGTACCGT        300
TCGTGGGATG ATTCCACACA AGACCAAGCG TGGTGCTGCT GCTCTTGCAC GTTTGAAGGT        360
GTTTGAGGGA GTACCACCTC CTTATGACAA GGTCAAGAGA ATGGTCATTC CTGATGCTCT        420
CAAGGTGTTG AGGCTTCAGG CTGGTCACAA GTACTGCTTG TTGGGACGTT TGTCTTCTGA        480
AGTTGGCTGG AACCATTACG ATACCATCAA GGAGCTTGAG GTGAAGAGAA AGGAGAGGTC        540
ACAAGCTTTG TATGAGCGTA AGAAGCAACT CACCAAGCTC AGGGCAAAGG CCGAGAAGGT        600
TGCAGAGGAG AAACTTGGAT CCCAGCTCGA TGTTCTTGCA TCGATCAAGT ACTGAAGAAA        660
ATCAGCATCT ATCTTTTGGT TTAACTCTTG TTTTGGTTTT TATCTATTCA GATTTTGTTT        720
TCTTCCTTGT ATCACTGTTG AAGTTTATCA CCTCATTTCA GTTTTATTTA TCAGTTGATA        780
CTTCAATCCT TAGGGA                                                        796
TypePositionOrientation
ORF 2 - 652: forward
ORF 3 - 116: forward
ORF 135 - 203: forward
ORF 496 - 62: reverse
ORF 552 - 794: forward
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